7C74
Crystal structure of yak lactoperoxidase using data obtained from crystals soaked in CaCl2 at 2.73 A resolution
Replaces: 6LO7Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-04 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.060, 80.590, 74.830 |
Unit cell angles | 90.00, 101.31, 90.00 |
Refinement procedure
Resolution | 53.010 - 2.730 |
Rwork | 0.195 |
R-free | 0.29190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6LO7 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.466 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.010 | 2.800 |
High resolution limit [Å] | 2.730 | 2.730 |
Rmerge | 0.123 | 0.314 |
Rpim | 0.079 | 0.197 |
Number of reflections | 16875 | 1174 |
<I/σ(I)> | 6.5 | 3 |
Completeness [%] | 99.9 | 100 |
Redundancy | 3.5 | |
CC(1/2) | 0.960 | 0.940 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 | 298 | 0.2M CaCl2, 20% PEG 3350 |