7C72
Structure of a mycobacterium tuberculosis puromycin-hydrolyzing peptidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2018-12-12 |
Detector | DECTRIS PILATUS3 X CdTe 1M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 63 |
Unit cell lengths | 183.950, 183.950, 146.310 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.490 - 3.000 |
R-factor | 0.178582720641 |
Rwork | 0.177 |
R-free | 0.21811 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3azo |
RMSD bond length | 0.008 |
RMSD bond angle | 1.222 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | BALBES |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.490 | 3.107 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.241 | 3.358 |
Rmeas | 0.247 | 3.448 |
Rpim | 0.056 | 0.781 |
Number of reflections | 56249 | 5581 |
<I/σ(I)> | 7.97 | 0.86 |
Completeness [%] | 99.9 | 100 |
Redundancy | 19.5 | 19.5 |
CC(1/2) | 0.996 | 0.297 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 287.15 | 0.1 M BIS-TRIS propane pH 7, 2.4 M DL-Malic acid pH 7.0 20 % (v/v) glycerol |