7C6Y
Crystal structure of beta-glycosides-binding protein (W41A) of ABC transporter in an open state (Form II)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-08-21 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.350, 63.250, 103.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.030 - 1.700 |
R-factor | 0.1743 |
Rwork | 0.172 |
R-free | 0.21080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7c63 |
RMSD bond length | 0.017 |
RMSD bond angle | 2.128 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.030 | 54.030 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.074 | 0.072 | 0.350 |
Rmeas | 0.079 | 0.078 | 0.372 |
Rpim | 0.026 | 0.027 | 0.126 |
Total number of observations | 373282 | 2619 | 17715 |
Number of reflections | 41739 | 356 | 2100 |
<I/σ(I)> | 21.3 | 37.2 | 5.7 |
Completeness [%] | 97.2 | 99.8 | 94.3 |
Redundancy | 8.9 | 7.4 | 8.4 |
CC(1/2) | 0.997 | 0.991 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 293 | 0.2 M Ammonium sulphate, 40% PEG 8000 |