7C5Z
Crystal structure of spring viremia of carp virus phosphoprotein central domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2018-01-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.900, 54.110, 89.890 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.920 - 1.500 |
R-factor | 0.2079 |
Rwork | 0.207 |
R-free | 0.22560 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 0.799 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.930 | 1.540 |
High resolution limit [Å] | 1.500 | 1.500 |
Number of reflections | 30365 | 2184 |
<I/σ(I)> | 13.7 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 12.7 | |
CC(1/2) | 0.998 | 0.673 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 289.15 | 0.1 M Ammonium acetate, 0.1 M Bis-Tris pH 5.5, 17% PEG 10000 |