Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BYP

Lysozyme structure SASE1 from SASE mode

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsPAL-XFEL BEAMLINE NCI
Synchrotron sitePAL-XFEL
BeamlineNCI
Temperature [K]293
Detector technologyCCD
Collection date2019-11-28
DetectorRAYONIX MX-225
Wavelength(s)1.2782
Spacegroup nameP 43 21 2
Unit cell lengths78.735, 78.735, 37.970
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.840 - 1.600
R-factor0.1813
Rwork0.180
R-free0.20230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1vds
RMSD bond length0.007
RMSD bond angle1.050
Data reduction softwareCrystFEL (version 0.9.1)
Data scaling softwareCrystFEL (version 0.9.1)
Phasing softwarePHENIX (version 1.18.2_3874)
Refinement softwarePHENIX ((1.18.2_3874: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.8401.630
High resolution limit [Å]1.6001.600
Number of reflections298522736
<I/σ(I)>6.130.73
Completeness [%]99.3
Redundancy432.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE291100 mM sodium acetate (pH 4.0), 6% (w/v) polyethylene glycol 8,000, and 3.5 M NaCl

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon