7BXS
2-amino-3-ketobutyrate CoA ligase from Cupriavidus necator glycine binding form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-06 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.692, 101.802, 69.832 |
Unit cell angles | 90.00, 112.98, 90.00 |
Refinement procedure
Resolution | 47.730 - 2.500 |
R-factor | 0.1713 |
Rwork | 0.169 |
R-free | 0.22730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fc4 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.886 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.730 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 26198 | 3804 |
<I/σ(I)> | 15.5 | |
Completeness [%] | 99.9 | |
Redundancy | 6.9 | |
CC(1/2) | 0.997 | 0.900 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.2 M Lithium sulfate monohydrate, 0.1 M BIS-TRIS pH 6.5, 25% w/v PEG3350, 3% w/v Dextran sulfate sodium salt (Mr 5000) |