7BWJ
crystal structure of SARS-CoV-2 antibody with RBD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9796 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.230, 90.150, 112.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.552 - 2.850 |
R-factor | 0.2214 |
Rwork | 0.219 |
R-free | 0.26400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6m0j |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.15_3459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.150 | 2.920 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.154 | 1.452 |
Number of reflections | 17230 | 1273 |
<I/σ(I)> | 14.3 | |
Completeness [%] | 99.9 | |
Redundancy | 12.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2M magnesium formate dihydrate, 0.1M sodium acetate trihydrate, pH 4.0, 18% PEG 5000 mme |