7BU3
Structure of alcohol dehydrogenase YjgB in complex with NADP from Escherichia coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-04 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97934 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 64.970, 138.990, 168.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.550 - 2.000 |
R-factor | 0.1616 |
Rwork | 0.160 |
R-free | 0.19950 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 7bu2 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.903 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.18_3845: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.550 | 1.490 |
High resolution limit [Å] | 1.450 | 1.450 |
Number of reflections | 134685 | 9859 |
<I/σ(I)> | 8.07 | |
Completeness [%] | 100.0 | |
Redundancy | 13.6 | |
CC(1/2) | 0.998 | 0.038 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris-HCl, pH 7.0, 16% (w/v) PEG 3350 , 0.2 M Lithium Sulfate, 5 mM NADPH |