Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BSH

Crystal structure of a NIR-emitting DNA-stabilized Ag16 nanocluster (Abasic mutant)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths28.223, 35.960, 43.482
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.710 - 1.200
R-factor0.0783
Rwork0.077
R-free0.08840
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6jr4
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]27.71027.7101.230
High resolution limit [Å]1.2005.3601.200
Rmerge0.0600.0340.292
Rmeas0.0650.0380.318
Total number of observations181315
Number of reflections267732991968
<I/σ(I)>18.8447.666.19
Completeness [%]99.998.799.2
Redundancy6.7727.0076.476
CC(1/2)0.9990.9990.972
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293MOPS, Spermine, calcium nitrate, MPD

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon