7BRF
Structure of NADH complex of Thermotoga maritima alpha-glucuronidase at 2.15 Angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-02-20 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.330, 81.060, 88.760 |
Unit cell angles | 90.00, 103.02, 90.00 |
Refinement procedure
Resolution | 36.833 - 2.150 |
R-factor | 0.1799 |
Rwork | 0.178 |
R-free | 0.21550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vjt |
RMSD bond length | 0.002 |
RMSD bond angle | 0.528 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.9) |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.833 | 36.830 | 2.220 |
High resolution limit [Å] | 2.150 | 8.860 | 2.150 |
Rmerge | 0.176 | 0.049 | 0.990 |
Rmeas | 0.191 | 0.053 | 1.079 |
Rpim | 0.073 | 0.021 | 0.424 |
Number of reflections | 27625 | 413 | 2388 |
<I/σ(I)> | 8.1 | 24.6 | 1.9 |
Completeness [%] | 100.0 | 98.7 | 100 |
Redundancy | 6.7 | 6.5 | 6.4 |
CC(1/2) | 0.993 | 0.998 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 300 | 12-18% PEG 3350, 0.2 M trilithium citrate, 0.1 M imidazole pH 5.8, 2-propanol |