7BPF
Structure of L-threoninol nucleic acid - RNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2019-05-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.90000 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 52.996, 33.344, 54.055 |
Unit cell angles | 90.00, 115.64, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.750 |
R-factor | 0.27 |
Rwork | 0.269 |
R-free | 0.28800 |
Structure solution method | MAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.655 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | AutoSol |
Refinement software | REFMAC (5.8.0266) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.500 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.060 | 0.307 |
Rmeas | 0.079 | 0.397 |
Rpim | 0.051 | 0.250 |
Number of reflections | 8609 | 2064 |
<I/σ(I)> | 13.9 | |
Completeness [%] | 98.7 | 99.1 |
Redundancy | 4.3 | |
CC(1/2) | 0.989 | 0.944 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 28% PEG 400, 0.1M HEPES (pH 7.5), 0.2M Calcium chloride |