7BNH
Complex structure at atomic resolution of SH3b domain with benzoic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-29 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 33.954, 54.781, 51.490 |
Unit cell angles | 90.00, 92.40, 90.00 |
Refinement procedure
Resolution | 17.210 - 0.840 |
R-factor | 0.0854 |
Rwork | 0.085 |
R-free | 0.10120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5leo |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19rc6) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.501 | 37.501 | 0.890 |
High resolution limit [Å] | 0.840 | 2.520 | 0.840 |
Rmerge | 0.028 | 0.025 | 0.132 |
Rmeas | 0.032 | 0.028 | 0.167 |
Total number of observations | 535196 | ||
Number of reflections | 141746 | 6419 | 6716 |
<I/σ(I)> | 27.6 | 54.19 | 5.31 |
Completeness [%] | 83.7 | 99.3 | 24.6 |
Redundancy | 3.776 | 4.436 | 2.35 |
CC(1/2) | 0.999 | 0.999 | 0.968 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | COUNTER-DIFFUSION | 6.5 | 293 | 0.2 M Ammonium sulfate, 0.1 M MES monohydrate pH 6.5, 30% PEG 5K |