7BFK
X-ray structure of SS-RNase-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-02 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.968, 70.747, 53.545 |
Unit cell angles | 90.00, 90.93, 90.00 |
Refinement procedure
Resolution | 26.820 - 1.890 |
R-factor | 0.1859 |
Rwork | 0.184 |
R-free | 0.21880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vq8 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.449 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.960 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.072 | 0.310 |
Number of reflections | 17350 | 1684 |
<I/σ(I)> | 15.2 | 2.4 |
Completeness [%] | 99.4 | 96.3 |
Redundancy | 3 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 293 | 32% w/v PEG 4000, 0.2 M sodium acetate trihydrate, 0.1 M Tris-HCl pH 7.4 and 1% v/v acetonitrile |