7BCP
Crystal structure of the sugar acid binding protein DctPAm from Advenella mimigardefordensis strain DPN7T in complex with gluconate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-12 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 0.967 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.931, 62.312, 98.193 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.890 - 2.000 |
R-factor | 0.1789 |
Rwork | 0.177 |
R-free | 0.23090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7bbr |
RMSD bond length | 0.014 |
RMSD bond angle | 1.220 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.890 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.040 | 0.290 |
Number of reflections | 44008 | 12289 |
<I/σ(I)> | 22.17 | 5.99 |
Completeness [%] | 95.7 | |
Redundancy | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 | 298 | PEG4000 pH7.0 |