7BC0
Crystal structure of aldo-keto reductase from Agrobacterium tumefaciens in a binary complex with NADPH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-30 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 3 |
Unit cell lengths | 108.928, 108.928, 108.928 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.510 - 1.830 |
R-factor | 0.1917 |
Rwork | 0.191 |
R-free | 0.20860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7bby |
RMSD bond length | 0.012 |
RMSD bond angle | 1.683 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.510 | 44.470 | 1.870 |
High resolution limit [Å] | 1.830 | 8.970 | 1.830 |
Rmerge | 0.189 | 0.036 | 4.196 |
Rmeas | 0.193 | 0.037 | 4.282 |
Rpim | 0.039 | 0.008 | 0.854 |
Total number of observations | 8409 | 58748 | |
Number of reflections | 38236 | 372 | 2355 |
<I/σ(I)> | 14.1 | 69.2 | 1 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 24.5 | 22.6 | 24.9 |
CC(1/2) | 0.999 | 1.000 | 0.439 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 0.1 M SPG 25% w/v PEG 1500 |