7BB5
Crystal structure of anti-CRISPR protein AcrIF9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-07 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.976200 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 77.285, 77.285, 75.663 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.649 - 2.300 |
R-factor | 0.1866 |
Rwork | 0.183 |
R-free | 0.22270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6VQV_A |
RMSD bond length | 0.003 |
RMSD bond angle | 0.479 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | MOLREP (11.7.02) |
Refinement software | PHENIX (1.12-2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.649 | 54.649 | 2.420 |
High resolution limit [Å] | 2.300 | 7.270 | 2.300 |
Rmerge | 0.065 | 0.461 | |
Rmeas | 0.145 | 0.069 | 0.474 |
Rpim | 0.030 | 0.017 | 0.091 |
Total number of observations | 4184 | 19637 | |
Number of reflections | 5344 | 207 | 752 |
<I/σ(I)> | 17.4 | 24.5 | 9.3 |
Completeness [%] | 99.9 | 100 | 99.8 |
Redundancy | 24.9 | 20.2 | 26.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | Crystallization buffer was 0.1 M Tris-HCl pH 8.5, 3.0M NaCl |