7BAY
Crystal structure of CbpF from Streptococcus pneumoniae complexed with a Ytterbium derivative
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97934 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 114.904, 52.207, 73.990 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.530 - 2.650 |
R-factor | 0.2028 |
Rwork | 0.201 |
R-free | 0.24190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2v05 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.396 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18_3855) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.530 | 2.780 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.097 | 0.708 |
Rpim | 0.035 | 0.262 |
Number of reflections | 13491 | 1761 |
<I/σ(I)> | 10.1 | |
Completeness [%] | 99.8 | |
Redundancy | 8.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | ammonium sulfate PEG 8000 sodium cacodylate |