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7B7H

The glucuronoyl esterase OtCE15A R268A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.008
Spacegroup nameP 1
Unit cell lengths47.333, 47.298, 51.112
Unit cell angles61.95, 67.92, 88.27
Refinement procedure
Resolution43.150 - 1.800
R-factor0.1851
Rwork0.183
R-free0.22240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6gs0
RMSD bond length0.007
RMSD bond angle0.897
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.1501.861
High resolution limit [Å]1.7961.796
Rmerge0.1201.256
Number of reflections321713093
<I/σ(I)>6.840.95
Completeness [%]96.692.99
Redundancy3.63.6
CC(1/2)0.9950.461
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5298Morpheus screen consisting of 0.1 M buffer system 1 (imidazole and MES), 30% precipitant mix 2 (ethylene glycol and PEG 8000) and amino acid additives (L-Glutamate, Alanine (racemic); Glycine; Lysine HCl (racemic); Serine (racemic)). Soaking was carried out in a saturated solution of Bnz-GlcA in 10% DMSO and 90% mother liquor for 30 seconds before being flash frozen.

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PDB entries from 2024-11-06

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