7B69
BK Polyomavirus VP1 pentamer core(residues 26-299) mutant C104S
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-12-15 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.9126 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 62.067, 135.717, 156.434 |
| Unit cell angles | 90.00, 94.98, 90.00 |
Refinement procedure
| Resolution | 102.350 - 1.474 |
| Rwork | 0.181 |
| R-free | 0.19710 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4mj0 |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.637 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 102.350 | 1.550 |
| High resolution limit [Å] | 1.470 | 1.470 |
| Rmerge | 0.060 | |
| Rmeas | 0.072 | |
| Rpim | 0.039 | 0.387 |
| Number of reflections | 418028 | 51986 |
| <I/σ(I)> | 9.2 | 1.1 |
| Completeness [%] | 96.6 | 82.6 |
| Redundancy | 2.8 | 1.5 |
| CC(1/2) | 0.997 | 0.700 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 298 | 17 % PEG 3350, 0.3 M sodium formate |
