7B2S
Crystal structure of SPRY domain of TRIM9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-30 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.00003 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 61.620, 45.280, 57.657 |
Unit cell angles | 90.00, 106.96, 90.00 |
Refinement procedure
Resolution | 35.910 - 1.500 |
R-factor | 0.1432 |
Rwork | 0.142 |
R-free | 0.17380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4x8n |
RMSD bond length | 0.016 |
RMSD bond angle | 1.593 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0266) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.910 | 35.910 | 1.540 |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.030 | 0.041 | 0.056 |
Rmeas | 0.036 | 0.046 | 0.069 |
Rpim | 0.015 | 0.021 | 0.029 |
Number of reflections | 24080 | 282 | 1760 |
<I/σ(I)> | 33.9 | 19.5 | |
Completeness [%] | 98.6 | 94.6 | 97.6 |
Redundancy | 5.8 | 4.7 | 5.4 |
CC(1/2) | 0.998 | 0.995 | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 30% PEG 8000, 0.2 M Ammonium sulfate |