7B2R
Crystal structure of NHL domain of TRIM2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-30 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.00003 |
Spacegroup name | P 1 |
Unit cell lengths | 43.620, 44.223, 68.230 |
Unit cell angles | 74.06, 86.93, 62.38 |
Refinement procedure
Resolution | 38.500 - 1.600 |
R-factor | 0.1576 |
Rwork | 0.156 |
R-free | 0.19270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6d69 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.515 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0266) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.500 | 38.500 | 1.640 |
High resolution limit [Å] | 1.600 | 7.160 | 1.600 |
Rmerge | 0.048 | 0.058 | 0.227 |
Rmeas | 0.058 | 0.064 | 0.293 |
Rpim | 0.026 | 0.028 | 0.131 |
Number of reflections | 52021 | 606 | 3888 |
<I/σ(I)> | 15.9 | 5.1 | |
Completeness [%] | 91.1 | 94.8 | 92.1 |
Redundancy | 4.7 | 4.6 | 4.9 |
CC(1/2) | 0.998 | 0.997 | 0.962 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 25% Medium molecular weight PEG Smears, 0.1M MES pH 6.5 |