7AVP
Crystal structure of marine actinobacteria clade rhodopsin (MAR) in the O state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-21 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97242 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 50.633, 40.417, 60.428 |
Unit cell angles | 90.00, 101.37, 90.00 |
Refinement procedure
Resolution | 59.240 - 1.090 |
R-factor | 0.1342 |
Rwork | 0.133 |
R-free | 0.15260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jsi |
RMSD bond length | 0.008 |
RMSD bond angle | 0.988 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | MOLREP |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.241 | 1.181 |
High resolution limit [Å] | 1.076 | 1.076 |
Rpim | 0.024 | 0.364 |
Number of reflections | 71975 | 3599 |
<I/σ(I)> | 13.74 | 1.91 |
Completeness [%] | 89.9 | |
Redundancy | 13.1 | |
CC(1/2) | 0.990 | 0.747 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 10% PEG 6000 140 mM NaCl 0.1M NaAcetate pH 4.6 |