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7AUP

Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with PCP-InsP7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979260
Spacegroup nameP 32 2 1
Unit cell lengths61.702, 61.702, 95.844
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.720 - 1.850
R-factor0.2258
Rwork0.223
R-free0.26820
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)7aun
RMSD bond length0.011
RMSD bond angle1.826
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7201.890
High resolution limit [Å]1.8501.850
Rmerge0.0520.652
Rpim0.0130.160
Number of reflections186251141
<I/σ(I)>33.26.2
Completeness [%]100.0100
Redundancy18.617.9
CC(1/2)1.0000.915
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.529120% PEG 3350, 0.1 M Sodium acetate pH 4.5, 0.1 M NaCl. Protein buffer: 20 mM Tris pH 8.0, 150 mM NaCl, 1 mM DTT, 10 mM PCP-InsP7.

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