7AU0
Structure of P. aeruginosa PBP3 in complex with a benzoxaborole (Compound 7)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91587 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.575, 82.676, 88.616 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.450 - 2.170 |
Rwork | 0.199 |
R-free | 0.26190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hzr |
RMSD bond length | 0.010 |
RMSD bond angle | 1.639 |
Data reduction software | XDS (Jan 26, 2018) |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.450 | 2.212 |
High resolution limit [Å] | 2.170 | 2.174 |
Rmerge | 0.189 | 2.652 |
Rpim | 0.066 | 0.931 |
Number of reflections | 27129 | 1341 |
<I/σ(I)> | 8.2 | |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 8.8 | 8.6 |
CC(1/2) | 0.996 | 0.452 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 25%(w/v) polyethylene glycol 3350, 0.1M Bis-Tris propane, 1%(w/v) protamine sulphate, pH 6 |