7AJX
The X-ray Structure of L,D-transpeptidase LdtA from Vibrio cholerae in complex with meropenem
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979160 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.877, 101.224, 115.285 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.340 - 2.550 |
Rwork | 0.209 |
R-free | 0.26700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7aj9 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.452 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.386 | 2.660 |
High resolution limit [Å] | 2.550 | 2.550 |
Rpim | 0.068 | 1.038 |
Number of reflections | 22790 | 2750 |
<I/σ(I)> | 9.2 | 1 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 6.7 | 6.8 |
CC(1/2) | 0.997 | 0.516 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 298 | 0.1M HEPES pH 7 + 10% PEG 8000 + 10% Ethylene Glycol |