Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7ADA

Crystal structure of helicase Pif1 from Thermus oshimai mutant Q164C-E409C

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-01-16
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.978910
Spacegroup nameP 1 21 1
Unit cell lengths74.070, 58.679, 118.155
Unit cell angles90.00, 92.21, 90.00
Refinement procedure
Resolution52.550 - 3.340
R-factor0.2477
Rwork0.245
R-free0.30160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6s3e
RMSD bond length0.004
RMSD bond angle0.877
Data reduction softwareXDS (Mar 15, 2019, built on 20191211)
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.5503.460
High resolution limit [Å]3.3403.340
Rmerge0.0490.600
Rmeas0.0540.647
Rpim0.0210.241
Number of reflections150021501
<I/σ(I)>24.542.79
Completeness [%]99.699.8
Redundancy6.97.1
CC(1/2)0.9980.922
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.52980.1 M Sodium Hepes-MOPS (pH 7.5) 0.03 M CaCl2 0.03 M MgCl2 10% PEG8000 20% ethylene glycol.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon