7ACL
Crystal structure of E. coli HTH-type transcriptional regulator RcdA at 2.05 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.595, 76.608, 105.181 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.357 - 2.049 |
R-factor | 0.1883 |
Rwork | 0.185 |
R-free | 0.24890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5x5i |
RMSD bond length | 0.008 |
RMSD bond angle | 0.980 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.357 | 43.357 | 2.170 |
High resolution limit [Å] | 2.049 | 6.090 | 2.050 |
Rmerge | 0.090 | 0.036 | 0.954 |
Rmeas | 0.093 | 0.038 | 1.000 |
Number of reflections | 20613 | 886 | 3131 |
<I/σ(I)> | 18.58 | 58.34 | 2.11 |
Completeness [%] | 98.9 | 99 | 94.9 |
Redundancy | 12.624 | 11.633 | 10.864 |
CC(1/2) | 0.999 | 0.999 | 0.774 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M magnesium formate, 15% PEG3350 |