7AB1
Crystal structure of MerTK kinase domain in complex with Gilteritinib
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.976254 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 93.302, 94.120, 70.734 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.651 - 1.930 |
R-factor | 0.2375 |
Rwork | 0.234 |
R-free | 0.29790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 3BRB |
RMSD bond length | 0.012 |
RMSD bond angle | 1.534 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | AMoRE |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.651 | 46.651 | 2.051 |
High resolution limit [Å] | 1.927 | 5.825 | 1.927 |
Rmerge | 0.115 | 0.126 | 1.116 |
Rmeas | 0.125 | 0.137 | 1.269 |
Rpim | 0.050 | 0.054 | 0.594 |
Total number of observations | 5878 | 4179 | |
Number of reflections | 18953 | 948 | 949 |
<I/σ(I)> | 9.8 | 18.8 | 1.5 |
Completeness [%] | 88.3 | 99.9 | 56.3 |
Redundancy | 5.3 | 6.2 | 4.4 |
CC(1/2) | 0.996 | 0.994 | 0.808 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 293 | 0.1M Tris pH 8.5, 4.3M NaCl |