Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7A8S

de novo designed ba8-barrel sTIM11 with an alpha-helical extension

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2016-12-11
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.000030
Spacegroup nameP 41 21 2
Unit cell lengths50.510, 50.510, 133.274
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.230 - 1.580
R-factor0.2015
Rwork0.200
R-free0.23990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5bvl
RMSD bond length0.007
RMSD bond angle1.092
Data reduction softwareXDS (20180126)
Data scaling softwareXSCALE (20180126)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.2301.640
High resolution limit [Å]1.5801.580
Rmerge0.0812.161
Rmeas0.0862.484
Rpim0.0291.178
Number of reflections1979718063
<I/σ(I)>12.750.4
Completeness [%]96.978.4
Redundancy8.13.8
CC(1/2)0.9990.321
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.2M Lithium sulfate, 0.1M Tris pH 8.5, 30% PEG 4000

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon