7A8S
de novo designed ba8-barrel sTIM11 with an alpha-helical extension
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-11 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.000030 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 50.510, 50.510, 133.274 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.230 - 1.580 |
R-factor | 0.2015 |
Rwork | 0.200 |
R-free | 0.23990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bvl |
RMSD bond length | 0.007 |
RMSD bond angle | 1.092 |
Data reduction software | XDS (20180126) |
Data scaling software | XSCALE (20180126) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.230 | 1.640 |
High resolution limit [Å] | 1.580 | 1.580 |
Rmerge | 0.081 | 2.161 |
Rmeas | 0.086 | 2.484 |
Rpim | 0.029 | 1.178 |
Number of reflections | 197971 | 8063 |
<I/σ(I)> | 12.75 | 0.4 |
Completeness [%] | 96.9 | 78.4 |
Redundancy | 8.1 | 3.8 |
CC(1/2) | 0.999 | 0.321 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.2M Lithium sulfate, 0.1M Tris pH 8.5, 30% PEG 4000 |