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7A2Y

Crystal structure of the Fyn SH3 domain L112V-S114N-S115T-E121L-R123H mutant in complex with VSL12 at pH 4.0

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9792
Spacegroup nameP 21 21 21
Unit cell lengths32.878, 32.916, 62.653
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution17.630 - 0.970
R-factor0.1325
Rwork0.132
R-free0.14610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ua6
Data reduction softwareXDS
Data scaling softwareAimless (0.5.31)
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2-3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]17.63017.6301.030
High resolution limit [Å]0.9703.0800.970
Rmerge0.0320.0200.428
Rmeas0.0350.0220.467
Rpim0.0140.0090.184
Total number of observations243421841731917
Number of reflections3788613895183
<I/σ(I)>21.270.32.9
Completeness [%]93.697.189.2
Redundancy6.46.16.2
CC(1/2)1.0000.9990.922
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP42980.5 M ammonium sulfate, 0.1 sodium acetate

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PDB entries from 2024-09-04

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