7ZYM
Crystal Structure of EGFR-T790M/C797S in Complex with Brigatinib
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9150 |
Spacegroup name | I 2 3 |
Unit cell lengths | 146.100, 146.100, 146.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.180 - 2.500 |
R-factor | 0.1939 |
Rwork | 0.192 |
R-free | 0.22370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6s89 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.561 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.180 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmeas | 0.166 | 1.464 |
Number of reflections | 18104 | 1985 |
<I/σ(I)> | 12.51 | 2.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.66 | 19.47 |
CC(1/2) | 0.996 | 0.773 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.4 K-Na-tartrate, 100 mM Na-MES (pH 6.5), 3.5 mg/mL EGFR-WT (in 100 mM NaCl, 25 mM Tris-HCl, 10 % glycerol, 1 mM TCEP) pH 8.0) 1 ul reservoir + 1 ul solution |