7ZVL
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9197 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 100.576, 138.392, 178.493 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 109.370 - 2.390 |
R-factor | 0.2193 |
Rwork | 0.216 |
R-free | 0.28600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5eml |
RMSD bond length | 0.008 |
RMSD bond angle | 1.566 |
Data reduction software | XDS (Feb 5, 2021 (BUILT 20210323)) |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC (5.8.0267) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 109.370 | 2.750 |
High resolution limit [Å] | 2.380 | 2.380 |
Number of reflections | 21837 | 1092 |
<I/σ(I)> | 12.8 | |
Completeness [%] | 85.6 | 63 |
Redundancy | 11.5 | |
CC(1/2) | 0.990 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 281 | 16% PEG3350, 100 mM Na citrate pH 5.4, 100mM Carboxylic acids |