7ZUD
Crystal structure of HIV-1 capsid IP6-CPSF6 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-17 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9688 |
Spacegroup name | P 6 |
Unit cell lengths | 90.741, 90.741, 56.588 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 78.580 - 2.930 |
R-factor | 0.2777 |
Rwork | 0.278 |
R-free | 0.33600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h47 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.740 |
Data reduction software | autoPROC |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 78.580 | 3.230 |
High resolution limit [Å] | 2.930 | 2.930 |
Number of reflections | 5698 | 1717 |
<I/σ(I)> | 7.6 | |
Completeness [%] | 98.4 | |
Redundancy | 1 | |
CC(1/2) | 0.984 | 0.425 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.3M Calcium chloride dihydrate, 0.3 M Magnesium chloride hexahydrate, 0.1 M Tris hydrochloride pH 8.5, 0.1 M Bicine, 20% PEG 4000 |