7ZQI
MHC class I from a wild bird in complex with a nonameric peptide P2
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-05-12 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97940 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 39.202, 48.780, 202.135 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.580 - 2.150 |
| R-factor | 0.18245 |
| Rwork | 0.180 |
| R-free | 0.22937 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5gjx |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.837 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 67.380 | 2.210 |
| High resolution limit [Å] | 2.150 | 2.150 |
| Number of reflections | 22044 | 1759 |
| <I/σ(I)> | 12.1 | 1.9 |
| Completeness [%] | 99.9 | 99.8 |
| Redundancy | 13 | 13.4 |
| CC(1/2) | 0.999 | 0.848 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 100 mM Hepes/MOPS, pH 7.0, 20 mM MgCl2, 40 mM CaCl2, 25 % (v/v) MPD, 25 % (w/v) PEG 1000, 25 % (w/v) PEG 3350 |






