7ZKR
Human GABARAP in complex with stapled peptide Pen3-ortho
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | I 2 3 |
Unit cell lengths | 99.030, 99.030, 99.030 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.510 - 1.100 |
R-factor | 0.1413 |
Rwork | 0.140 |
R-free | 0.16700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3d32 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.790 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.020 | 1.130 |
High resolution limit [Å] | 1.100 | 1.100 |
Rmeas | 0.132 | 1.694 |
Number of reflections | 65281 | 4816 |
<I/σ(I)> | 11.48 | 1.38 |
Completeness [%] | 100.0 | |
Redundancy | 17.77 | |
CC(1/2) | 0.998 | 0.559 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | magnesium acetate, sodium cacodylate, PEG 8000 |