7ZIM

JC Polyomavirus VP1 in complex with 3'-Sialyllactose glycomacromolecules (aromatic linker)

This is a non-PDB format compatible entry.

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SLS BEAMLINE X06DA
Synchrotron site	SLS
Beamline	X06DA
Temperature [K]	93
Detector technology	PIXEL
Collection date	2022-02-05
Detector	DECTRIS PILATUS 2M-F
Wavelength(s)	0.99
Spacegroup name	C 1 2 1
Unit cell lengths	150.146, 96.635, 128.555
Unit cell angles	90.00, 110.49, 90.00

Refinement procedure

Resolution	44.800 - 1.550
Rwork	0.167
R-free	0.19090
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	3nxd
RMSD bond length	0.008
RMSD bond angle	1.502
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHASER
Refinement software	REFMAC (5.8.0258)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	44.800	1.640
High resolution limit [Å]	1.550	1.550
Rmeas	0.100	1.300
Number of reflections	248912	39897
<I/σ(I)>	10.61
Completeness [%]	95.9
Redundancy	4.74
CC(1/2)	0.990	0.490

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP		293	0.1 M HEPES pH 7.5, 0.2 M KSCN, 12% (w/v) PEG 3350