7ZEU
Crystal structure of human Clusterin, crystal form II
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-02 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.77490 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 194.440, 46.438, 155.173 |
Unit cell angles | 90.00, 127.20, 90.00 |
Refinement procedure
Resolution | 29.770 - 3.500 |
R-factor | 0.2375 |
Rwork | 0.235 |
R-free | 0.28360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7zet |
Data reduction software | XDS (VERSION Feb 5, 2021) |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP (11.4.06) |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.590 | 48.590 | 3.830 |
High resolution limit [Å] | 3.500 | 8.570 | 3.500 |
Rmerge | 0.211 | 0.077 | 1.517 |
Rmeas | 0.229 | 0.083 | 1.664 |
Rpim | 0.085 | 0.031 | 0.672 |
Total number of observations | 103733 | 7130 | 19449 |
Number of reflections | 14413 | 1053 | 3408 |
<I/σ(I)> | 6.1 | 19.3 | 1.4 |
Completeness [%] | 99.8 | 99.4 | 99.6 |
Redundancy | 7.2 | 6.8 | 5.7 |
CC(1/2) | 0.995 | 0.995 | 0.619 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 277 | 24% PEG-1500, 20% glycerol |