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7Z1D

Nanobody H11-H6 bound to RBD

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-19
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9763
Spacegroup nameP 21 21 21
Unit cell lengths62.410, 65.080, 82.900
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.040 - 1.550
Rwork0.167
R-free0.18620
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6zbp
RMSD bond length0.006
RMSD bond angle1.315
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.0401.590
High resolution limit [Å]1.5501.550
Rmerge0.0831.243
Number of reflections488753509
<I/σ(I)>18.32.2
Completeness [%]98.597.1
Redundancy13.513.2
CC(1/2)0.9990.746
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M HEPES, pH 7.5 and 20% w/v PEG 8000

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