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7Z0Y

THSC20.HVTR04 Fab bound to SARS-CoV-2 Receptor Binding Domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-24
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9795
Spacegroup nameP 43 21 2
Unit cell lengths126.157, 126.157, 167.454
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.950
R-factor0.2198
Rwork0.219
R-free0.24090
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)AlphaFold
Data reduction softwareautoPROC
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.050
High resolution limit [Å]2.9502.950
Rmerge0.0560.340
Rmeas0.0800.437
Rpim0.0560.309
Number of reflections23099691
<I/σ(I)>17.43
Completeness [%]78.0
Redundancy22
CC(1/2)0.9910.598
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.52931.5M ammonium sulfate, 12%(v/v) isopropanol, 0.1M imidazole HCl pH 6.5

219869

PDB entries from 2024-05-15

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