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7YYK

Crystal structure of the O-fucosylated form of TSRs1-3 from the human thrombospondin 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2014-05-22
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9762
Spacegroup nameC 2 2 21
Unit cell lengths66.153, 85.197, 62.121
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.600
R-factor0.25103
Rwork0.249
R-free0.31663
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1lsl
RMSD bond length0.013
RMSD bond angle1.738
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.740
High resolution limit [Å]2.6002.600
Rmerge0.1970.859
Number of reflections5645813
<I/σ(I)>6.21.7
Completeness [%]99.8
Redundancy8.3
CC(1/2)0.9870.871
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291PEG 8000, zinc acetate, buffer MES

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