7YG3
Crystal structure of HLA-B*13:01
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 298.15 |
Detector technology | CCD |
Collection date | 2016-06-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.987 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.297, 82.768, 110.442 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.940 - 1.500 |
R-factor | 0.176 |
Rwork | 0.175 |
R-free | 0.19490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jqx |
RMSD bond length | 0.006 |
RMSD bond angle | 1.109 |
Phasing software | PHENIX (1.18.2_3874) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Number of reflections | 2150046 | 2837 |
<I/σ(I)> | 3.5 | |
Completeness [%] | 99.8 | 98.2 |
Redundancy | 6.5 | 12.5 |
CC(1/2) | 0.992 | 0.932 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289.15 | 0.1 M HEPES pH 6.5, 20% PEG 4000, 0.2 M NaCl |