7Y7R
QDE-1 in complex with DNA template, RNA primer and 3'-dGTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-28 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97928 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 101.366, 122.165, 114.921 |
Unit cell angles | 90.00, 109.29, 90.00 |
Refinement procedure
Resolution | 49.570 - 2.100 |
R-factor | 0.2087 |
Rwork | 0.207 |
R-free | 0.24910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j7n |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmerge | 0.080 | 0.045 | 0.446 |
Rmeas | 0.088 | 0.048 | 0.544 |
Rpim | 0.036 | 0.018 | 0.303 |
Total number of observations | 660472 | ||
Number of reflections | 143543 | 15449 | 11689 |
<I/σ(I)> | 13.1 | ||
Completeness [%] | 93.5 | 99.1 | 76.4 |
Redundancy | 4.6 | 6.8 | 2.3 |
CC(1/2) | 0.999 | 0.251 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 291 | PEG 4000, 200 mM KCl |