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7XVM

Crystal Structure of Nucleosome-H5 Linker Histone Assembly (sticky-169a DNA fragment)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]98.15
Detector technologyPIXEL
Collection date2017-09-15
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths105.160, 103.758, 212.955
Unit cell angles90.00, 100.97, 90.00
Refinement procedure
Resolution48.030 - 2.840
R-factor0.20155
Rwork0.200
R-free0.25898
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ut9 4qlc
RMSD bond length0.008
RMSD bond angle1.295
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.0302.990
High resolution limit [Å]2.8402.840
Number of reflections10515714236
<I/σ(I)>13.71
Completeness [%]98.892.4
Redundancy6.66.1
CC(1/2)0.9990.421
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29140-45mM CaCl2, 25mM KCl, 10mM Na-acetate (pH 4.5)

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PDB entries from 2024-05-15

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