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7XQV

The complex of nanobody Rh57 binding to GTP-bound RhoA active form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-06
DetectorDECTRIS EIGER2 X 4M
Wavelength(s)0.979
Spacegroup nameI 41 2 2
Unit cell lengths142.030, 142.030, 69.260
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution62.250 - 2.760
R-factor0.2228
Rwork0.220
R-free0.26970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1kmq
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1-4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]71.01071.0102.830
High resolution limit [Å]2.76012.3402.760
Rmerge0.3810.0723.889
Rmeas0.3890.0743.965
Rpim0.0770.0170.764
Total number of observations237878240818200
Number of reflections9414135688
<I/σ(I)>14.940.51.2
Completeness [%]99.999.6100
Redundancy25.317.826.5
CC(1/2)0.9980.9990.443
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29120% (w/v) PEG 8000; 100 mM Tris base/ Hydrochloric acid, pH 8.5; 200 mM MgCl2

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PDB entries from 2024-05-15

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