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7XPT

Crystal structrue of MtdL:GDP:Mn soaked with GDP-Glc

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-18
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979
Spacegroup nameC 1 2 1
Unit cell lengths162.275, 98.825, 58.102
Unit cell angles90.00, 96.77, 90.00
Refinement procedure
Resolution57.700 - 2.000
R-factor0.2174
Rwork0.215
R-free0.25900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7xpr
Data reduction softwareXDS
Data scaling softwareAimless (0.7.7)
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]80.57080.5702.050
High resolution limit [Å]2.0008.9402.000
Rmerge0.0970.0390.919
Rmeas0.1060.0431.000
Rpim0.0410.0170.388
Total number of observations352445403926413
Number of reflections554557084201
<I/σ(I)>11.130.61.7
Completeness [%]90.297.993.7
Redundancy6.45.76.3
CC(1/2)0.9980.9980.879
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2830.1 M tri-sodium citrate pH 5.6, 10% (w/v) PEG 4000, 10% (w/v) isopropanol

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PDB entries from 2024-05-15

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