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7XB5

Structure of the ligand-binding domain of S. cerevisiae Upc2 in fusion with T4 lysozyme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]110
Detector technologyCCD
Collection date2015-08-04
DetectorADSC QUANTUM 270
Wavelength(s)0.97934
Spacegroup nameC 2 2 21
Unit cell lengths65.744, 125.085, 155.272
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.980 - 3.440
R-factor0.2601
Rwork0.258
R-free0.30080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4n9n
RMSD bond length0.012
RMSD bond angle1.724
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.560
High resolution limit [Å]3.4403.500
Rmerge0.0980.561
Number of reflections8514418
<I/σ(I)>32.84.8
Completeness [%]97.996.5
Redundancy7.27.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72960.1 M HEPES pH 7.0, 12.5% PEG 8000, 0.2 M sodium citrate

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