7X8G
Crystal structure of ENL T1(H116P) mutant YEATS domain in complex with histone H3 acetylation at K27
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-05-13 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 155.143, 48.501, 47.791 |
Unit cell angles | 90.00, 101.13, 90.00 |
Refinement procedure
Resolution | 27.100 - 1.910 |
R-factor | 0.1983 |
Rwork | 0.197 |
R-free | 0.22970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5j9s |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.150 | 1.900 |
Rmerge | 0.124 | 0.096 | 0.423 |
Rmeas | 0.135 | 0.105 | 0.461 |
Rpim | 0.053 | 0.042 | 0.180 |
Total number of observations | 179110 | ||
Number of reflections | 27427 | 1432 | 1381 |
<I/σ(I)> | 4.7 | ||
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 6.5 | 6.3 | 6.4 |
CC(1/2) | 0.988 | 0.924 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 291 | 20 % (w/v) PEG 4000, 0.1M sodium citrate pH 5.6, 20 % (v/v) 2-propanol |