7X7O
SARS-CoV-2 spike RBD in complex with neutralizing antibody UT28K
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL32XU |
| Synchrotron site | SPring-8 |
| Beamline | BL32XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-07 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.0000 |
| Spacegroup name | I 1 2 1 |
| Unit cell lengths | 138.249, 138.412, 221.107 |
| Unit cell angles | 90.00, 90.05, 90.00 |
Refinement procedure
| Resolution | 48.140 - 3.750 |
| R-factor | 0.305 |
| Rwork | 0.303 |
| R-free | 0.33580 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7jmp |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.836 |
| Data reduction software | XDS (VERSION Feb 5, 202) |
| Data scaling software | Aimless (0.7.7) |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.910 | 3.890 |
| High resolution limit [Å] | 3.750 | 3.750 |
| Number of reflections | 42875 | 16957 |
| <I/σ(I)> | 7.1 | |
| Completeness [%] | 99.9 | |
| Redundancy | 3.6 | |
| CC(1/2) | 0.921 | 0.469 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Citric acid pH5.0, 1.0 M Lithium chloride, 10% (w/v) PEG 6000 |






