7X3Z
Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 1 complexed with estrone and NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-02-08 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.97931 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.050, 108.150, 117.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.990 - 2.250 |
R-factor | 0.19316 |
Rwork | 0.190 |
R-free | 0.25465 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jtv |
RMSD bond length | 0.008 |
RMSD bond angle | 1.606 |
Data reduction software | MOSFLM (7.2.0) |
Data scaling software | SCALA (3.3.22) |
Phasing software | MOLREP (11.4.05) |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.370 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmeas | 0.202 | 0.509 |
Rpim | 0.075 | 0.185 |
Total number of observations | 196005 | 28323 |
Number of reflections | 26759 | 3824 |
<I/σ(I)> | 7.9 | 3.4 |
Completeness [%] | 99.9 | |
Redundancy | 7.3 | 7.4 |
CC(1/2) | 0.983 | 0.932 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 300 | KH2PO4, PEG 8000 |