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7WQ8

Crystal structure of SARS-CoV-2 main protease in complex with Z-DEVD-FMK

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL15A1
Synchrotron siteNSRRC
BeamlineBL15A1
Temperature [K]100
Detector technologyCCD
Collection date2020-06-20
DetectorRAYONIX MX300HE
Wavelength(s)1.00000
Spacegroup nameC 1 2 1
Unit cell lengths112.178, 54.636, 45.279
Unit cell angles90.00, 101.13, 90.00
Refinement procedure
Resolution27.532 - 2.200
Rwork0.178
R-free0.22210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6y2e 6lu7
RMSD bond length0.009
RMSD bond angle1.429
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.280
High resolution limit [Å]2.2002.200
Rmerge0.0670.350
Number of reflections136741363
<I/σ(I)>19.693.73
Completeness [%]98.895.43
Redundancy3.83.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.15 M DL-Malic acid pH 7.0, 20% w/v PEG3350

246031

PDB entries from 2025-12-10

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